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Detail Data SLC52A1


Basic description
Gene Name SLC52A1
Protein Name Solute carrier family 52, riboflavin transporter, member 1 (Porcine endogenous retrovirus A receptor 2) (PERV-A receptor 2) (Protein GPR172B) (Riboflavin transporter 1) (hRFT1)
Family SLC52
Category -
Reaction name -
Reaction -

Network
No data
Structure


[Overview]
Position 1 0 2 0 3 0 4 0 5 0 6 0 7 0 8 0 9 0 1 0 0 1 1 0 1 2 0 1 3 0 1 4 0 1 5 0 1 6 0 1 7 0 1 8 0 1 9 0 2 0 0 2 1 0 2 2 0 2 3 0 2 4 0 2 5 0 2 6 0 2 7 0 2 8 0 2 9 0 3 0 0 3 1 0 3 2 0 3 3 0 3 4 0 3 5 0 3 6 0 3 7 0 3 8 0 3 9 0 4 0 0 4 1 0 4 2 0 4 3 0 4 4 0 AA Pred 
        10         20         30         40         50         60         70         80         90        100        110        120        130        140        150        160        170        180        190        200        210        220        230        240        250        260        270        280        290        300        310        320        330        340        350        360        370        380        390        400        410        420        430        440 
MAAPTLGRLV LTHLLVALFG MGSWAAVNGI WVELPVVVKD LPEGWSLPSY LSVVVALGNL GLLVVTLWRQ LAPGKGEQVP IQVVQVLSVV GTALLAPLWH HVAPVAGQLH SVAFLTLALV LAMACCTSNV TFLPFLSHLP PPFLRSFFLG QGLSALLPCV LALVQGVGRL ECPPAPTNGT SGPPLDFPER FPASTFFWAL TALLVTSAAA FRGLLLLLPS LPSVTTGGSG PELQLGSPGA EEEEKEEEEA LPLQEPPSQA AGTIPGPDPE AHQLFSAHGA FLLGLMAFTS AVTNGVLPSV QSFSCLPYGR LAYHLAVVLG SAANPLACFL AMGVLCRSLA GLVGLSLLGM LFGAYLMALA ILSPCPPLVG TTAGVVLVVL SWVLCLCVFS YVKVAASSLL HGGGRPALLA AGVAIQVGSL LGAGAMFPPT SIYHVFQSRK DCVDPCGP 
CCCCHHHHHH HHHHHHHHHH HHHHHHHCCH HCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HHHHHHHHHH HCCCCCCHHH HHHHHHHHHH HHHHHHHHCC CCCCCCCCCC HHHHHHHHHH HHHHCCCCCH HHHHHHHCCC CHHHHHHHHC CHHHHHHHHH HHHHHCCCCC CCCCCCCCCC CCCCCCCCCC CCHHHHHHHH HHHHHHHHHH HHHHHHHHHC CCCCCCCCCC CCCCCCCCCC CCCCHHHHCC CCCCCCCCCC CCCCCCCCCC HHCCCHHHHH HHHHHHHHHH HHHCCCCCCC CCCCCCCCCH HHHHHHHHHH HHHHHHHHHH HHHCCCCCHH HHHHHHHHHH HHHHHHHHHH HCCCCCCCCC CHHHHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHCCCC CCCCCCCC
[Overview] SLC52A1 SLC52A2 SLC52A3 
SLC52A1   MAAPTLGRLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLGLLVVTLWRQLAPGKGEQVPIQVVQVLSVVGTA---LLAPLWHHVAPVAGQLHSVAFLTLALVLAMACCTSNVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALVQGVGRLEC-----------PPAPTNGT--------------SG--PPLDFPE------RFPASTFFWALTALLVTSAAAFRGLLLLLPSLPSVTTGGSGPEL--QLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGP------DPEAHQLFSAHGAFLLGLMAFTSAVTNGVLPSVQSFSCLPYGRLAYHLAVVLGSAANPLACFLAMGVLCRSLAGLVGLSLLGMLFGAYLMALAILSPCPPLVGTTAGVVLVVLSWVLCLCVFSYVKVAASSLLHGGGRPALLAAGVAIQVGSLLGAGAMFPPTSIYHVFQSRKDCVDPCGP
SLC52A2   MAAPTPARPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLGLLVVTLWRRLAPGKDEQVPIRVVQVLGMVGTA---LLASLWHHVAPVAGQLHSVAFLALAFVLALACCASNVTFLPFLSHLPPRFLRSFFLGQGLSALLPCVLALVQGVGRLEC-----------PPAPINGT--------------PG--PPLDFLE------RFPASTFFWALTALLVASAAAFQGLLLLLPPPPSVPTGELGSGL--QVGAPGAEE---EVEESSPLQEPPSQAAGTTPGP------DPKAYQLLSARSACLLGLLAATNALTNGVLPAVQSFSCLPYGRLAYHLAVVLGSAANPLACFLAMGVLCRSLAGLGGLSLLGVFCGGYLMALAVLSPCPPLVGTSAGVVLVVLSWVLCLGVFSYVKVAASSLLHGGGRPALLAAGVAIQVGSLLGAVAMFPPTSIYHVFHSRKDCADPCDS
SLC52A3   MA-------FLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHHFRPSCLSEVPI-IFTLLG-VGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCTSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPVPTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAF----FVLQRQPRCWEASVEDLLNDQV----------TLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAPCCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA

Variant
check gene name residue number Reference Amino Acid / Variant Amino Acid minor allele frequency rs number
-- SLC52A1 42 P/L 0.000163119 rs200242588
-- SLC52A1 56 A/V 0.000400271 rs138410039
-- SLC52A1 70 Q/R 0.941285 rs346822
-- SLC52A1 84 V/I 0.000143934 rs773631155
-- SLC52A1 108 Q/H 0.000123651 rs765575367
-- SLC52A1 124 A/V 0.0012131 rs146289149
-- SLC52A1 257 P/L 0.000195635 rs199704379
-- SLC52A1 271 A/V 0.583851 rs346821
-- SLC52A1 296 V/M 0.253844 rs2304445
-- SLC52A1 310 R/H 0.00215025 rs9897165
-- SLC52A1 331 A/P 0.000132787 rs184838357
-- SLC52A1 344 G/D 0.000258663 rs560626465
-- SLC52A1 386 L/V 0.00039032 rs187609896
-- SLC52A1 406 P/L 0.000123755 rs373765126
-- SLC52A1 410 A/E 0.000107818 rs112874988
-- SLC52A1 441 D/H 0.000738729 rs148979394

Phylogenetic tree

Pathway
Priority Gene Name Reactome (Gene) Reactome (Pathway)
SLC52A1 SLC52A1 [plasma membrane] Vitamin B2 (riboflavin) metabolism

Disease
Gene Name Reactome (Gene) Reactome (Pathway)
No data